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Advanced Signal Processing Techniques for Bioinformatics

  1. Research Article

    DNA Microarray Data Analysis: A Novel Biclustering Algorithm Approach

    Biclustering algorithms refer to a distinct class of clustering algorithms that perform simultaneous row-column clustering. Biclustering problems arise in DNA microarray data analysis, collaborative filtering,...

    Alain B. Tchagang and Ahmed H. Tewfik

    EURASIP Journal on Advances in Signal Processing 2006 2006:059809

    Published on: 6 June 2006

  2. Research Article

    MALDI-TOF Baseline Drift Removal Using Stochastic Bernstein Approximation

    Stochastic Bernstein (SB) approximation can tackle the problem of baseline drift correction of instrumentation data. This is demonstrated for spectral data: matrix-assisted laser desorption/ionization time-of-...

    Joseph Kolibal and Daniel Howard

    EURASIP Journal on Advances in Signal Processing 2006 2006:063582

    Published on: 15 May 2006

  3. Research Article

    Domain-Based Predictive Models for Protein-Protein Interaction Prediction

    Protein interactions are of biological interest because they orchestrate a number of cellular processes such as metabolic pathways and immunological recognition. Recently, methods for predicting protein intera...

    Xue-Wen Chen and Mei Liu

    EURASIP Journal on Advances in Signal Processing 2006 2006:032767

    Published on: 20 April 2006

  4. Research Article

    Extended -Regular Sequence for Automated Analysis of Microarray Images

    Microarray study enables us to obtain hundreds of thousands of expressions of genes or genotypes at once, and it is an indispensable technology for genome research. The first step is the analysis of scanned mi...

    Hee-Jeong Jin, Bong-Kyung Chun and Hwan-Gue Cho

    EURASIP Journal on Advances in Signal Processing 2006 2006:013623

    Published on: 6 April 2006

  5. Research Article

    Towards Inferring Protein Interactions: Challenges and Solutions

    Discovering interacting proteins has been an essential part of functional genomics. However, existing experimental techniques only uncover a small portion of any interactome. Furthermore, these data often have...

    Ya Zhang, Hongyuan Zha, Chao-Hsien Chu and Xiang Ji

    EURASIP Journal on Advances in Signal Processing 2006 2006:037349

    Published on: 5 April 2006

  6. Research Article

    MASSP3: A System for Predicting Protein Secondary Structure

    A system that resorts to multiple experts for dealing with the problem of predicting secondary structures is described, whose performances are comparable to those obtained by other state-of-the-art predictors....

    Giuliano Armano, Alessandro Orro and Eloisa Vargiu

    EURASIP Journal on Advances in Signal Processing 2006 2006:017195

    Published on: 30 March 2006

  7. Research Article

    Rigid Molecule Docking: FPGA Reconfiguration for Alternative Force Laws

    Molecular docking is one of the primary computational methods used by pharmaceutical companies to try to reduce the cost of drug discovery. A common docking technique, used for low-resolution screening or as a...

    Tom VanCourt, Yongfeng Gu, Vikas Mundada and Martin Herbordt

    EURASIP Journal on Advances in Signal Processing 2006 2006:097950

    Published on: 19 March 2006