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Sequence and Genome Analysis

  1. Reference assisted assembly requires the use of a reference sequence, as a model, to assist in the assembly of the novel genome. The standard method for identifying the best reference sequence for the assembly...

    Authors: Bilal Wajid, Erchin Serpedin, Mohamed Nounou and Hazem Nounou

    Citation: EURASIP Journal on Bioinformatics and Systems Biology 2012 2012:18

    Content type: Research

    Published on:

  2. Genomic studies are now being undertaken on thousands of samples requiring new computational tools that can rapidly analyze data to identify clinically important features. Inferring structural variations in ca...

    Authors: Ryan Bressler, Jake Lin, Andrea Eakin, Thomas Robinson, Richard Kreisberg, Hector Rovira, Theo Knijnenburg, John Boyle and Ilya Shmulevich

    Citation: EURASIP Journal on Bioinformatics and Systems Biology 2012 2012:15

    Content type: Research

    Published on:

  3. CpG dinucleotide clusters also referred to as CpG islands (CGIs) are usually located in the promoter regions of genes in a deoxyribonucleic acid (DNA) sequence. CGIs play a crucial role in gene expression and ...

    Authors: Rajasekhar Kakumani, Omair Ahmad and Vijay Devabhaktuni

    Citation: EURASIP Journal on Bioinformatics and Systems Biology 2012 2012:12

    Content type: Research

    Published on: